BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003C02SP1|AL425085
(935 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1772 1490 0.0
>3x_Contig1772
Length = 25851
Score = 1490 bits (742), Expect = 0.0
Identities = 888/940 (94%), Gaps = 6/940 (0%)
Strand = Plus / Minus
Query: 1 tcgtctcacgagcttcatcataaacgatcttagagcaatactggctcataattaagaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25611 tcgtctcacgagcttcatcataaacgatcttagagcaatactggctcataattaagaatg 25552
Query: 61 ttcgttcagggcccaatggattgtggagacattcgtctaagtgtcgagtgagatcrtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 25551 ttcgttcagggcccaatggattgtggagacattcgtctaagtgtcgagtgagatcatttg 25492
Query: 121 ttttcragattaatagtacaacactgggtattttcgagagagtactcatcavatcaccca 180
||||| ||||||||||||||||||||||||||||||| ||| ||||||||| |||| |||
Sbjct: 25491 ttttcaagattaatagtacaacactgggtattttcgaaagaatactcatcaaatcaacca 25432
Query: 181 acaagtctccttcagttatttttgaggacataactgaccatttcctcctgagatcttggt 240
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 25431 acaagtctccttcagttatttttgaagacataactg-ccatttcctcctgagatcttggt 25373
Query: 241 ttagggatatcgtgattcagcgcggtatcaatrctacggccagtgattgcggctgcgaat 300
|||| |||||||| ||||| |||||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 25372 ttagagatatcgtaattcaacgcggtatcaatactacggccagtaattgcagctgcaaat 25313
Query: 301 gggggaacctgctcgtcattgacatgggcaaactgtttcgcataatkgtgtggttkctct 360
||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct: 25312 aggggaacctgctcgtcattgacatgggcaaactgtttcgcataataatgtaatttctct 25253
Query: 361 tggtcttggtcaaggagcgctaaccaarrtttggcatagtctcgtctcatctccgtggta 420
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 25252 tggtcttgatcaaggagcgctaaccaaaatttggcatagtctcgtctcatctccgtagta 25193
Query: 421 ggtgttctgtataacccgtggtcatatnggatggtttcgagattktgncccttatdtggc 480
||||||||||||||||||||||||||| | ||| |||||| ||| || ||||||| ||||
Sbjct: 25192 ggtgttctgtataacccgtggtcatatagaatgatttcgaaattatgacccttatatggc 25133
Query: 481 ttttctagcgccctgatggccaagtttcctccatgtgggtcacggtgaatgccaacgttt 540
|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 25132 ttttctagcgccctgatggccaagtttcctccatgtggatcacagtgaatgccaacgttt 25073
Query: 541 ggggtgagagtcatcctattgaggatatgagatagacatgaggagacctctgatcttgag 600
|| |||| | |||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 25072 ggagtgaaaatcatcctattgaagatatgagatagacatgaagagacctctgatcttgag 25013
Query: 601 atgtgatgttcgtccatgtatttgatattrtccaacctttctccgtgtagatattccaat 660
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 25012 atgtgatgttcgtccatgtatttgatattatccaacctttctccgtgtagatattccaat 24953
Query: 661 atcaatattctcttattagcacttacaactttaggaattcttaatgcwgttttgtttaca 720
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 24952 atcaatattctcttattagcacttacaactttaggaattcttaatgctgttttgtttaca 24893
Query: 721 cagctgataaartcttctgcggatttcttggcgttttcagcttcttttgtaaaatctagc 780
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24892 cagctgataaaatcttctgcggatttcttggcgttttcagcttcttttgtaaaatctagc 24833
Query: 781 tcaatataartcgaagactgtdattcatcccctagccatgtwaatgggtattctggg-ac 839
||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||
Sbjct: 24832 tcaatataaatcgaagactgtaattcatcccctagccatgttaatgggtattctgggaac 24773
Query: 840 accacgtccaacagattaadaactgtttgggt-agcatcacatctaatgg-acaaattcc 897
||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||
Sbjct: 24772 accacgtccaacagattaaaaactgtttgggtaagcatcacatctaatggaacaaattcc 24713
Query: 898 ttcaactgagggtgct-gcacttgactgc-wctttttcgc 935
|||||||||||||||| |||||||||||| |||||||||
Sbjct: 24712 ttcaactgagggtgctggcacttgactgctactttttcgc 24673
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3912
Number of Sequences: 1807
Number of extensions: 3912
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)